政大機構典藏-National Chengchi University Institutional Repository(NCCUR):Item 140.119/86638

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政大機構典藏 > 資訊學院 > 資訊科學系 > 期刊論文 > Item 140.119/86638

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题名:	T-Coffee: a web server for the multiple sequence alignment of protein and RNA sequences using structural information and homology extension
作者:	Chang, Jia-Ming 張家銘 Notredame, Cedric Taly, Jean-François Montanyola, Alberto Orobitg, Miquel Xenarios, Ioannis Moretti, Sebastien Tommaso, Di;Paolo
贡献者:	資科系
日期:	2011-07
上传时间:	2016-04-27 15:29:56 (UTC+8)
摘要:	This article introduces a new interface for T-Coffee, a consistency-based multiple sequence alignment program. This interface provides an easy and intuitive access to the most popular functionality of the package. These include the default T-Coffee mode for protein and nucleic acid sequences, the M-Coffee mode that allows combining the output of any other aligners, and template-based modes of T-Coffee that deliver high accuracy alignments while using structural or homology derived templates. These three available template modes are Expresso for the alignment of protein with a known 3D-Structure, R-Coffee to align RNA sequences with conserved secondary structures and PSI-Coffee to accurately align distantly related sequences using homology extension. The new server benefits from recent improvements of the T-Coffee algorithm and can align up to 150 sequences as long as 10,000 residues and is available from both http://www.tcoffee.org and its main mirror http://tcoffee.crg.cat.
關聯:	Nucleic Acids Research, 39, W13-17
数据类型:	article
DOI 連結:	http://dx.doi.org/10.1093/nar/gkr245
DOI:	10.1093/nar/gkr245
显示于类别:	[資訊科學系] 期刊論文

文件中的档案:

档案	描述	大小	格式	浏览次数
13-17.pdf		2083Kb	Adobe PDF2	1014	检视/开启

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